Escherichia coli

awni2003's picture

Molecular Characterization of Escherichia Coli Isolates from Patients with Urinary Tract Infections in Palestine

Journal Title, Volume, Page: 
J Med Microbiol. 2014 Feb;63(Pt 2):229-34. doi: 10.1099/jmm.0.067140-0. Epub 2013 Nov 15
Year of Publication: 
2013
Authors: 
Kamel Adwan
Department of Biology and Biotechnology, Faculty of Science, An-Najah National University, Nablus, Palestine
Naser Jarrar
Department of Biology and Biotechnology, Faculty of Science, An-Najah National University, Nablus, Palestine
Naser Jarrar
Department of Biology and Biotechnology, Faculty of Science, An-Najah National University, Nablus, Palestine
Awni Abu-Hijleh
Department of Biology and Biotechnology, Faculty of Science, An-Najah National University, Nablus, Palestine
Current Affiliation: 
Department of Biology and Biotechnology, Faculty of Science, An-Najah National University, Nablus, Palestine
Ghaleb Adwan
Department of Biology and Biotechnology, Faculty of Science, An-Najah National University, Nablus, Palestine
Elena Awwad
Central Veterinary Laboratory, Directorate of Veterinary Services and Animal Health, Ministry of Agriculture, Palestine
Preferred Abstract (Original): 

Antibiotic resistance of Escherichia coli isolated from urinary tract infections (UTIs) is increasing worldwide. A total of 41 E. coli isolates were obtained from urine samples from hospitalized patients with a UTI in three hospitals in the northern districts of the West Bank, Palestine during March and June 2011. Resistance rates were: erythromycin (95 %), trimethoprim–sulfamethoxazole (59 %), ciprofloxacin (56 %), gentamicin (27 %), imipenem (22 %), amoxicillin (93 %), amoxicillin–clavulanic acid (32 %), ceftazidime (66 %) and cefotaxime (71 %). No meropenem-resistant isolates were identified in this study. Among the isolates, phylogenetic group B2 was observed in 13 isolates, D in 12 isolates, A in 11 isolates and B1 in five isolates. Thirty-five of the isolates were positive for an extended-spectrum β-lactamase phenotype. Among these isolates, the blaCTX-M gene was detected in 25, and eight harboured the blaTEM gene. None of the isolates contained the blaSHV gene. Transformation experiments indicated that some of the β-lactamase genes (i.e. blaCTX-M and blaTEM) with co-resistance to erythromycin and gentamicin were plasmid encoded and transmissible. Apart from this, enterobacterial repetitive intergenic consensus-PCR (ERIC-PCR) revealed that the 41 isolates were genetically diverse and comprised a heterogeneous population with 11 ERIC-PCR profiles at a 60 % similarity level.
The GenBank/EMBL/DDBJ accession numbers for three blaCTX-M gene sequences and one blaTEM gene sequence of Escherichia coli are KF696718, KF696719, KF696720 and KF696717, respectively.

Abbreviations:
ERIC
enterobacterial repetitive intergenic consensus
ESBL
extended-spectrum β-lactamase
UPGMA
unweighted pair group method for arithmetic averages
UTI
urinary tract infection

adwank's picture

Molecular Characterization of Escherichia Coli Isolates from Patients with Urinary Tract Infections in Palestine

Journal Title, Volume, Page: 
J Med Microbiol. 2014 Feb;63(Pt 2):229-34. doi: 10.1099/jmm.0.067140-0. Epub 2013 Nov 15
Year of Publication: 
2013
Authors: 
Kamel Adwan
Department of Biology and Biotechnology, Faculty of Science, An-Najah National University, Nablus, Palestine
Current Affiliation: 
Department of Biology and Biotechnology, Faculty of Science, An-Najah National University, Nablus, Palestine
Naser Jarrar
Department of Biology and Biotechnology, Faculty of Science, An-Najah National University, Nablus, Palestine
Awni Abu-Hijleh
Department of Biology and Biotechnology, Faculty of Science, An-Najah National University, Nablus, Palestine
Ghaleb Adwan
Department of Biology and Biotechnology, Faculty of Science, An-Najah National University, Nablus, Palestine
Elena Awwad
Central Veterinary Laboratory
Preferred Abstract (Original): 

Antibiotic resistance of Escherichia coli isolated from urinary tract infections (UTIs) is increasing worldwide. A total of 41 E. coli isolates were obtained from urine samples from hospitalized patients with a UTI in three hospitals in the northern districts of the West Bank, Palestine during March and June 2011. Resistance rates were: erythromycin (95 %), trimethoprim-sulfamethoxazole (59 %), ciprofloxacin (56 %), gentamicin (27 %), imipenem (22 %), amoxicillin (93 %), amoxicillin-clavulanic acid (32 %), ceftazidime (66 %) and cefotaxime (71 %). No meropenem-resistant isolates were identified in this study. Among the isolates, phylogenetic group B2 was observed in 13 isolates, D in 12 isolates, A in 11 isolates and B1 in five isolates. Thirty-five of the isolates were positive for an extended-spectrum β-lactamase phenotype. Among these isolates, the blaCTX-M gene was detected in 25, and eight harboured the blaTEM gene. None of the isolates contained the blaSHV gene. Transformation experiments indicated that some of the β-lactamase genes (i.e. blaCTX-M and blaTEM) with co-resistance to erythromycin and gentamicin were plasmid encoded and transmissible. Apart from this, enterobacterial repetitive intergenic consensus-PCR (ERIC-PCR) revealed that the 41 isolates were genetically diverse and comprised a heterogeneous population with 11 ERIC-PCR profiles at a 60 % similarity level.

Majd Shhadi's picture

Bioconversion of restaurant waste into Polyhydroxybutyrate (PHB) by recombinant E. coli through anaerobic digestion

Journal Title, Volume, Page: 
International Journal of Environment and Waste Management (2013), 11, (1), 27-37. Publisher: (Inderscience Enterprises Ltd., ) CODEN:IJEWAZ ISSN:1478-9876
Authors: 
Majd Khalid Eshtaya
Faculty of Biotechnology and Biomolecular Sciences, Department of Bioprocess Technology, Universiti Putra Malaysia, 43400 UPM Serdang, Selangor, Malaysia
Current Affiliation: 
Chemical Engineering Department, An-Najah National University, P.O. Box 7, Nablus, Palestine
Aini Abdul Rahman
Faculty of Biotechnology and Biomolecular Sciences, Department of Bioprocess Technology, Universiti Putra Malaysia, 43400 UPM Serdang, Selangor, Malaysia
Mohd Ali Hassan
Faculty of Biotechnology and Biomolecular Sciences, Department of Bioprocess Technology, Universiti Putra Malaysia, 43400 UPM Serdang, Selangor, Malaysia
Preferred Abstract (Original): 

The effect of temperature (30°C, 37°C, uncontrolled) and initial pH adjustment at pH 7 in the anaerobic digestion process was investigated to enhance the production of organic acids from restaurant waste. The highest organic acid level obtained was 39.6 g/L on the fifth day of fermentation conducted at 30°C and initial pH 7. The acids produced corresponded to 39.4% of the yield based on the initial concentration of substrate. The main organic acids produced were lactic and acetic acids. Using organic acids from fermented restaurant waste, recombinant Escherichia coli pnDTM2 gave PHB concentration, PHB content and PHB productivity of 9.2 g/L, 44% w/w and 0.54 g/L/h, respectively, in a pH stat fed-batch culture.

Syndicate content